Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATTTTGCAAGCCACTTTTCTATATACATCCACTGCAGTTTTTGCAAG
(((((((((((((((((....&.))))...))))))))...))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017666
GeneSymbolZNF280C
Binding site2042,2089
Score0.846
Seed1
Au0.647
Energy-18.0
Binding len25
Me-3.938
Phylopstem0.7679472826086955
Phylopflank1.1973601599999997
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end4
PositionCDS
2D Structure