Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATCATTTCTACAAATACATTGTCTTGCATTTAAAAATGCTAGGG
.((((((((((((((((.....&.)))))))).............)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_017667
GeneSymbolVPS50
Binding site5330,5375
Score0.923
Seed1
Au0.662
Energy-18.6
Binding len31
Me-3.793
Phylopstem0.5070121655172414
Phylopflank0.47701276375
Longest consecutive pairings8
Position of longest consecutive pairings22
Pairings in 3prime end3
Position3UTR
2D Structure