Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCAGACCTGTGCAAAGCAC
.(((.((.(((((((((((((&))))))))).)).))))...))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017667
GeneSymbolVPS50
Binding site1072,1096
Score0.846
Seed0
Au0.559
Energy-17.9
Binding len24
Me-10.226
Phylopstem4.990989966666666
Phylopflank5.809485499999997
Longest consecutive pairings9
Position of longest consecutive pairings15
Pairings in 3prime end8
PositionCDS
2D Structure