Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGAGAATATGAAGCTGAATTGGAGACGCAGCTGCAAC
(((((((((((..(.(((...&.))).)..))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017668
GeneSymbolNDE1
Binding site220,259
Score0.846
Seed1
Au0.515
Energy-22.8
Binding len20
Me-9.309
Phylopstem5.105690263636363
Phylopflank4.516030296249999
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure