Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCCGACTACCTTGTGGTCTACCTGCGGCTGCT
..(((((((((((.(((((((&.))))))....).))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017670
GeneSymbolOTUB1
Binding site517,552
Score0.846
Seed1
Au0.353
Energy-23.0
Binding len26
Me-5.814
Phylopstem0.6289044166666666
Phylopflank1.2080050654999999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure