Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTAGAAATGACCCAGAATTCCTACAGAGCCAAGGAGCCT
....(((((((((((((((...&.))))))))..............))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001354579
GeneSymbolATR
Binding site5495,5534
Score0.846
Seed0
Au0.485
Energy-24.3
Binding len31
Me-9.547
Phylopstem5.389652965517241
Phylopflank4.348995409999999
Longest consecutive pairings8
Position of longest consecutive pairings22
Pairings in 3prime end5
PositionCDS
2D Structure