Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGTTCTGAGCCAGTAGCTGCC
..((((((((((((...(((.&))).......)))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017671
GeneSymbolFERMT1
Binding site3874,3898
Score0.846
Seed1
Au0.456
Energy-20.0
Binding len24
Me-5.925
Phylopstem2.2120365
Phylopflank2.8110253787499997
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure