Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TAATGGCAGCTGTGAG
((((((((((.((((......&)))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017673
GeneSymbolSWT1
Binding site2558,2574
Score0.923
Seed1
Au0.662
Energy-19.7
Binding len16
Me-6.995
Phylopstem2.1160807000000004
Phylopflank2.5720965725000005
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure