Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTCCCCAACCCAGCAGGCAT
.(((.((((.(((((.(((((&)))))...)))))))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017673
GeneSymbolSWT1
Binding site2390,2413
Score0.923
Seed0
Au0.529
Energy-18.6
Binding len23
Me-9.388
Phylopstem0.6589374
Phylopflank1.6872552637500002
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end7
PositionCDS
2D Structure