Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTTGGAGAATGCTGGCTGCAGAGTGCCAGGGTAGCTAGAAAGGCTGGTCA
.((((((((((((((((((((&))).)).)))....))))))))........................)))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001354579
GeneSymbolATR
Binding site5593,5644
Score0.923
Seed1
Au0.441
Energy-23.8
Binding len51
Me-3.793
Phylopstem3.3497838519999994
Phylopflank3.7931951375000006
Longest consecutive pairings8
Position of longest consecutive pairings29
Pairings in 3prime end8
PositionCDS
2D Structure