Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCGTATGCTGATAATAGCCGAGCTCAAGATTCAGCTGCC
..(((((((((((((((((((&)))))))).............))))...........))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001354579
GeneSymbolATR
Binding site4047,4091
Score0.846
Seed1
Au0.559
Energy-21.8
Binding len44
Me-4.957
Phylopstem4.46498105116279
Phylopflank4.64008546875
Longest consecutive pairings8
Position of longest consecutive pairings36
Pairings in 3prime end8
PositionCDS
2D Structure