Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTAAAGAAACTGCAGCTA
....((((((((((...((((&)))).....)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001354579
GeneSymbolATR
Binding site3514,3534
Score1.0
Seed0
Au0.603
Energy-19.4
Binding len20
Me-10.515
Phylopstem5.20478286
Phylopflank5.08412457625
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure