Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CAACCGAGCAGCTGGGAA
((.((((((((((((......&)))))..))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017677
GeneSymbolMTMR8
Binding site835,853
Score0.846
Seed0
Au0.515
Energy-20.4
Binding len18
Me-5.728
Phylopstem0.45797428571428583
Phylopflank0.10218384374999992
Longest consecutive pairings7
Position of longest consecutive pairings4
Pairings in 3prime end2
PositionCDS
2D Structure