Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTCTTGGGAGCCGCTGGCTTGCT
..((((((((((((.((((((&)).))))..)))))).)))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017679
GeneSymbolBCAS3
Binding site768,792
Score0.846
Seed1
Au0.559
Energy-19.1
Binding len24
Me-5.692
Phylopstem4.461511091428571
Phylopflank5.404000248749998
Longest consecutive pairings6
Position of longest consecutive pairings9
Pairings in 3prime end7
PositionCDS
2D Structure