Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTACAGGTTTGGCTCCAGCAGCTGCT
..(((((((((((((((((((&)))))))))........)).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017681
GeneSymbolNUP62CL
Binding site196,225
Score0.923
Seed1
Au0.5
Energy-23.9
Binding len29
Me-4.957
Phylopstem0.1268547392857143
Phylopflank-0.006146617500000048
Longest consecutive pairings9
Position of longest consecutive pairings20
Pairings in 3prime end8
Position5UTR
2D Structure