Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTATGCCAGC
..(((((((((...........&))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_017684
GeneSymbolVPS13C
Binding site7338,7348
Score1.0
Seed1
Au0.515
Energy-15.9
Binding len10
Me-11.418
Phylopstem2.1438908888888886
Phylopflank2.870504713749999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure