Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCAGCCTCCTGAGTAGCTGGGAT
((.((((((((((((..((((&)))))))))......))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017684
GeneSymbolVPS13C
Binding site11715,11741
Score0.808
Seed0
Au0.441
Energy-20.1
Binding len26
Me-5.728
Phylopstem3.3692042777777775
Phylopflank3.4734526675
Longest consecutive pairings9
Position of longest consecutive pairings17
Pairings in 3prime end6
Position3UTR
2D Structure