Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGAGGAGCTGCGGAACAAGATTGTGGACCAGTGTGAGAGGCTGCAGT
((((((((((((((.(..(((&)))..).))))))...........................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017688
GeneSymbolBSPRY
Binding site225,274
Score0.846
Seed1
Au0.485
Energy-20.6
Binding len49
Me-4.673
Phylopstem3.429107487804877
Phylopflank1.64819203725
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure