Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCGGCCGCAGCG
.....(((((((((((..(((&)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017693
GeneSymbolBIVM
Binding site362,377
Score0.846
Seed0
Au0.25
Energy-22.9
Binding len15
Me-13.666
Phylopstem0.11696430909090907
Phylopflank0.022562733625000015
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure