Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCAACTTTTGGGACTTAATCAAGCTGCTCTGCAGCGTGCAGT
(((((((((((((((.(((((&))))))))))........................))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017694
GeneSymbolMFSD6
Binding site1617,1663
Score0.872
Seed1
Au0.5
Energy-21.4
Binding len46
Me-4.171
Phylopstem3.6418845950000005
Phylopflank3.480539535
Longest consecutive pairings10
Position of longest consecutive pairings36
Pairings in 3prime end7
PositionCDS
2D Structure