Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GTGACTCACTCCTGTAGTCCTAGCTACTCGGGGAGGCTGAGGCAGGATGATTGCTTAAGCCCAGGAGTTCGGGGTTA
.(((((((((((((((((...&.))))))))))..............................))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_017696
GeneSymbolMCM9
Binding site4625,4702
Score0.821
Seed1
Au0.471
Energy-27.8
Binding len49
Me-3.793
Phylopstem4.836263957446807
Phylopflank2.57085368175
Longest consecutive pairings10
Position of longest consecutive pairings38
Pairings in 3prime end5
Position3UTR
2D Structure