Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAAATCGTAACTTACAGCAAGCAGCATGCAGC
((((((((((.((((((((..&.))))))))..))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017697
GeneSymbolESRP1
Binding site2394,2428
Score0.923
Seed1
Au0.544
Energy-25.6
Binding len23
Me-6.762
Phylopstem0.4651166363636363
Phylopflank1.25223653375
Longest consecutive pairings8
Position of longest consecutive pairings14
Pairings in 3prime end6
Position3UTR
2D Structure