Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGCGACTGCGGGGCTGCAGA
(((((((((((((((((....&)))))))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017707
GeneSymbolASAP3
Binding site1369,1389
Score0.846
Seed1
Au0.309
Energy-24.3
Binding len20
Me-3.938
Phylopstem0.7412381789473684
Phylopflank1.1477104725
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end4
PositionCDS
2D Structure