Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGAGCTGGCTTCAGCTGCAGA
(((((((((.((((((.(((.&)))..)).)))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017707
GeneSymbolASAP3
Binding site3022,3045
Score0.885
Seed1
Au0.441
Energy-21.5
Binding len23
Me-5.18
Phylopstem5.404702777777778
Phylopflank4.728983895000001
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure