Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGGTTGGAGGCTGTCGTGTGGCTGAGCAGAGATGGCCAGCTGATGGGTCA
.((((((((((((((((((((&))))))...))))))).))............................))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_017708
GeneSymbolFAM83E
Binding site1126,1179
Score0.846
Seed1
Au0.426
Energy-27.9
Binding len53
Me-3.793
Phylopstem0.08517295000000004
Phylopflank-0.19523213499999995
Longest consecutive pairings7
Position of longest consecutive pairings37
Pairings in 3prime end8
Position5UTR
2D Structure