Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGTGCTCTTGCAACTGACGCAGTCACTGCAGC
(((((((((((((((((((((&.)).))))))))...)))))...)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017714
GeneSymbolTASP1
Binding site344,379
Score0.923
Seed1
Au0.456
Energy-23.2
Binding len30
Me-3.938
Phylopstem2.7937754892857143
Phylopflank2.2220949300000004
Longest consecutive pairings8
Position of longest consecutive pairings18
Pairings in 3prime end8
PositionCDS
2D Structure