Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGTGGGTCGCCTACAGCTGCT
..((((((((((((...((((&))))...))))))....)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001330630
GeneSymbolCAST
Binding site704,728
Score0.846
Seed1
Au0.544
Energy-18.3
Binding len24
Me-5.925
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings11
Pairings in 3prime end5
PositionCDS
2D Structure