Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGGGCTCCAGCTGCAGT
(((((((((.((((....(((&)))..)))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017719
GeneSymbolSNRK
Binding site1901,1921
Score0.846
Seed1
Au0.426
Energy-21.2
Binding len20
Me-6.149
Phylopstem4.991368555555556
Phylopflank4.4860112249999995
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure