Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCGTGGCTGCGGG
((((((((((((.....((((&)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017721
GeneSymbolCC2D1A
Binding site3245,3262
Score0.846
Seed1
Au0.279
Energy-22.0
Binding len17
Me-7.052
Phylopstem-0.3068109833333334
Phylopflank-0.6156269375000001
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure