Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGTACAGCCGAGCCAAGCAGA
((((.(((.((((((((((((&))))..)))))))))))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017722
GeneSymbolTRMT1
Binding site951,976
Score0.923
Seed0
Au0.397
Energy-21.8
Binding len25
Me-9.113
Phylopstem2.5301105714285717
Phylopflank2.3900978400000006
Longest consecutive pairings11
Position of longest consecutive pairings8
Pairings in 3prime end8
PositionCDS
2D Structure