Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTACCCAAGGGAACGGAGGATAATGATCAGAGAGCAACGATACCCAGTT
.(((((((((((((((((((((&))))))))..)))).)))).........................))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001330430
GeneSymbolRHCE
Binding site718,768
Score0.846
Seed1
Au0.471
Energy-22.5
Binding len50
Me-3.793
Phylopstem5.779635285714285
Phylopflank4.787335595
Longest consecutive pairings8
Position of longest consecutive pairings42
Pairings in 3prime end8
PositionCDS
2D Structure