Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGCAGCTCCTGGCTGTTCCTCACCTGAGGCTAGAGCAGCAGCTGCC
..((((((((.(((.((((((&.)))).....)).))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017728
GeneSymbolTMEM104
Binding site4066,4115
Score0.846
Seed1
Au0.397
Energy-22.3
Binding len26
Me-8.517
Phylopstem0.2728229
Phylopflank-0.15020921749999994
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure