Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCTTGAGGTAGTATCCGCACATGGAATTCTAGGGCCGCAGGTGTAT
.((((.((((((((.((....&.)).)))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017735
GeneSymbolTTC27
Binding site73,123
Score1.0
Seed0
Au0.515
Energy-22.0
Binding len18
Me-6.43
Phylopstem0.09811175
Phylopflank0.524460845
Longest consecutive pairings8
Position of longest consecutive pairings6
Pairings in 3prime end3
Position5UTR
2D Structure