Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATGTTGCAACTGGCCTCAAAGGAAAGCTGCAGG
((((((((((((((((((.((&)).))))))))).)..........)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017735
GeneSymbolTTC27
Binding site2296,2329
Score0.923
Seed1
Au0.515
Energy-20.9
Binding len33
Me-3.938
Phylopstem1.778231448275862
Phylopflank2.9909733500000004
Longest consecutive pairings9
Position of longest consecutive pairings21
Pairings in 3prime end7
PositionCDS
2D Structure