Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCATGTGCTGCTGTTGCAAA
(((((((.(((((.....(((&))).....))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017736
GeneSymbolTHUMPD1
Binding site1344,1366
Score0.923
Seed1
Au0.441
Energy-19.2
Binding len22
Me-8.077
Phylopstem-0.013266742857142863
Phylopflank-0.07107938875
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure