Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTCAGTGCGACCTGCTTTAACTCTGCAGCACCGCTGCAGCTGCC
..(((((((((((((((.(((&.))).)))).....))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017737
GeneSymbolFNBP1L
Binding site2757,2802
Score0.846
Seed1
Au0.426
Energy-24.1
Binding len26
Me-4.957
Phylopstem1.611264325
Phylopflank2.8492223118750006
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure