Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCCGCAGCCATGGCGGC
((((.(((((((((((.....&)))))))))))....)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017738
GeneSymbolCNTLN
Binding site14,34
Score0.846
Seed0
Au0.317
Energy-22.0
Binding len20
Me-8.057
Phylopstem0.8339578181818182
Phylopflank0.67865405
Longest consecutive pairings11
Position of longest consecutive pairings9
Pairings in 3prime end3
Position5UTR
2D Structure