Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGATGGTGACCCGGACGCAGCTGCT
..(((((((((..((...(((&.)))))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017738
GeneSymbolCNTLN
Binding site314,340
Score1.0
Seed1
Au0.368
Energy-21.3
Binding len18
Me-9.826
Phylopstem1.4140919666666667
Phylopflank1.7410033999999999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure