Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGTAATCGCAGCTA
....(((((((((((..((((&)))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017741
GeneSymbolDCAF16
Binding site3928,3945
Score1.0
Seed0
Au0.456
Energy-21.3
Binding len17
Me-9.78
Phylopstem0.3957518909090909
Phylopflank0.42323250249999994
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure