Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCTTAAAATGTATTTGGATTTCTGTTTTTGAACACTTATGATGCCAGGC
.((((((((.((..........&.)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_017748
GeneSymbolCWC25
Binding site2873,2925
Score0.923
Seed1
Au0.603
Energy-15.4
Binding len12
Me-8.15
Phylopstem4.336692025
Phylopflank4.7073759025
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure