Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGAGCGGAAGAAGATTGAGGAGCTTCAGCGGGAGCTGCGAG
((((((((.(.((((.(((.(&.).))))))).).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017748
GeneSymbolCWC25
Binding site231,274
Score0.923
Seed1
Au0.397
Energy-22.9
Binding len22
Me-8.052
Phylopstem0.20076085000000002
Phylopflank0.10706234649999997
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure