Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCGGGCTTCTGGAGCGGGGTTCCTGCAGCCGCAGAGGCAT
.(((..((((((((((.(((.&.)))))))))))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017751
GeneSymbolSMPD4
Binding site2772,2814
Score0.846
Seed0
Au0.382
Energy-26.7
Binding len20
Me-9.813
Phylopstem4.4682607
Phylopflank5.382557025500001
Longest consecutive pairings13
Position of longest consecutive pairings6
Pairings in 3prime end6
Position3UTR
2D Structure