Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGCTAGGTTGGTGGCATGATATGCCAGGG
.(((((((((..((((......&.))))..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_017754
GeneSymbolUHRF1BP1
Binding site5262,5292
Score0.923
Seed1
Au0.397
Energy-21.0
Binding len17
Me-9.965
Phylopstem0.7386272222222222
Phylopflank-0.017610826250000017
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure