Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTGCATTTCCTGTTTACATGCATGTGCTGGGG
.(((((((((..((((((((..&.))))))))...))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_017754
GeneSymbolUHRF1BP1
Binding site8092,8126
Score1.0
Seed1
Au0.588
Energy-19.7
Binding len22
Me-9.965
Phylopstem1.2283286666666666
Phylopflank0.19728516550000003
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure