Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCAGCTCACCAGCTGCAT
.((((((((.(((((..((((&)))).)))))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017754
GeneSymbolUHRF1BP1
Binding site3120,3142
Score0.897
Seed1
Au0.397
Energy-22.2
Binding len22
Me-5.269
Phylopstem0.41093863750000004
Phylopflank1.1204171987499996
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure