Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCAGGCTGCCGGGG
.(((((((..(..(((((....&))))))..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_017759
GeneSymbolINO80D
Binding site4361,4377
Score0.846
Seed1
Au0.441
Energy-18.1
Binding len16
Me-10.728
Phylopstem2.2784742857142857
Phylopflank2.88636255275
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure