Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGGATGACTGCAGGCTGCC
..((((((((((((((.((((&))))...)))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017759
GeneSymbolINO80D
Binding site4350,4373
Score0.923
Seed1
Au0.441
Energy-23.3
Binding len23
Me-4.957
Phylopstem2.5660486666666666
Phylopflank3.1749222999999995
Longest consecutive pairings10
Position of longest consecutive pairings6
Pairings in 3prime end7
Position3UTR
2D Structure