Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCACAGCAGCAGCCTCCGCAGCAGCAC
.(((.((((((((((((((((&))))).)))).........))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017759
GeneSymbolINO80D
Binding site993,1024
Score0.885
Seed0
Au0.441
Energy-22.5
Binding len31
Me-7.912
Phylopstem0.9321890192307692
Phylopflank0.54127807125
Longest consecutive pairings7
Position of longest consecutive pairings5
Pairings in 3prime end8
PositionCDS
2D Structure