Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACCAGCTGCAGCTGG
...((((((((((((...(((&)))..)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017763
GeneSymbolRNF43
Binding site913,931
Score1.0
Seed0
Au0.338
Energy-23.9
Binding len18
Me-6.748
Phylopstem1.4577916666666664
Phylopflank0.33311622500000004
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure