Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCTGACCAGCTGCC
..(((((((.(...((((((.&))))))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017765
GeneSymbolSLC66A1
Binding site541,559
Score0.923
Seed1
Au0.426
Energy-21.4
Binding len18
Me-11.692
Phylopstem4.721079428571429
Phylopflank3.5783101625
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure